Home
Genome
Euryhaline Browse
Stenohaline Browse
Pan GeneSet
Core GeneSet
Gene Family
Phylogenetic Tree
Core GeneSet Phylogenetic Tree
Data Statistics
Synteny
MicroCollinearity
MacroCollinearity
Transcriptomics
RNA-Seq Dataset
Gene expression profile
Search by GO ID
Search by KO ID
Co-expression Network
Core GeneSet Network
Search
Gene Search
Sequence Fetch
BLAST
Tools
GO Enrichment
KEGG Enrichment
Pairwise sequence alignment
Multiple sequence alignment (Muscle)
Primer designer
Gene prediction (GeneWise)
Genome alignment (Lastz)
Clustal omega
Download
Genome
RNA-Seq
Core/Pan Protein Fasta
About
Clustal omega
Enter type :
PROTEIN
DNA
RNA
Type of query :
Text
File
Sequences :
e.g.,
Example
Upload file:
Example file
Output format:
ClustalW with character counts
ClustalW
Pearson/FASTA
MSF
NEXUS
PHYLIP
SELEX
STOCKHOLM
VIENNA
Dealign Input Sequences:
yes
no
Mbed-Like Clustering Guide-Tree:
yes
no
Mbed-Like Clustering Iteration:
yes
no
Number of Combined Iterations:
default(0)
1
2
3
4
5
Max Guide Tree Iterations:
default
0
1
2
3
4
5
Max Hmm Iterations:
default
0
1
2
3
4
5
Distance Matrix:
yes
no
Guide Tree:
yes
no
Order:
aligned
input
Run
Result:
Alignments:
Download
Guide Tree:
Download
Phylogram:
Download
Linear
Radial
1